Medicare inpatient rehab denied: how to appeal

Quick answer

If Medicare (Original + Advantage) denied your inpatient rehabilitation, you can appeal, and the plan must give you its file and the criteria it used. Filing windows by plan type: 120 days from the notice (Original Medicare); 65 days from the notice (Medicare Advantage); 65 days from the notice (Part D). The date printed on your denial notice controls; it can only be later than these floors, never earlier.

Why Medicare (Original + Advantage) denies inpatient rehabilitation

Medicare is a federal program with two delivery modes, Original (fee-for-service Part A/B + Part D drug plans) and Advantage (private MA-C plans). Each has its own appeal ladder, and rights are stronger than most beneficiaries realize.

For inpatient rehabilitation specifically: Inpatient rehabilitation facility (IRF) stays are denied at admission or cut short mid-stay, usually on the argument that a lower level of care such as a skilled nursing facility would do. The appeal turns on the medical record showing why intensive, physician-supervised rehabilitation is required.

The law that controls this appeal

For Medicare and Medicare Advantage, the IRF coverage criteria at 42 CFR 412.622(a)(3): a need for active and ongoing therapy in at least two disciplines (one being PT or OT), an intensive program (generally 3 hours a day at least 5 days a week), close physician supervision, and a reasonable expectation of measurable improvement. Medicare Advantage plans may not apply stricter internal criteria than traditional Medicare (42 CFR 422.101(b)). Commercial plans apply their own level-of-care criteria (often MCG or InterQual), which must be disclosed on request under the rules that govern your plan (see the table above).

Note for Medicare (Original + Advantage): where the standard above cites ERISA or the ACA appeal rules, those describe employer and Marketplace plans. The windows and levels that apply to Medicare (Original + Advantage) are in the table below.

At a glance

Medicare (Original + Advantage) appeals: the rule, the deadline and the next level, by plan type

Original Medicare, Medicare Advantage and Part D each have their own federal ladder. The notice you received says which one you are in.

Plan type	Rule that governs	File your appeal within	The plan must answer	If the plan says no again
Original Medicare (Parts A and B) Fee-for-service Medicare. The Medicare Summary Notice lists the denial.	42 CFR Part 405, Subpart I.	Redetermination: 120 days from receipt of the initial determination (42 CFR 405.942). Reconsideration by a Qualified Independent Contractor: 180 days from the redetermination (§ 405.962). ALJ hearing: 60 days (§ 405.1002).	The Medicare Administrative Contractor decides a redetermination within 60 days (§ 405.950); the QIC decides within 60 days (§ 405.970).	QIC reconsideration, ALJ hearing (amount-in-controversy threshold), Medicare Appeals Council, federal district court. Fast-track appeals of service terminations go to the Quality Improvement Organization (42 CFR 405.1200 to 405.1206).
Medicare Advantage (Part C) A private plan that replaces Original Medicare. The card says Medicare Advantage, HMO, PPO or PFFS.	42 CFR Part 422, Subpart M (§§ 422.560 to 422.634). Coverage decisions must follow Original Medicare rules (42 CFR 422.101).	65 calendar days from the date on the denial notice to request the plan's reconsideration (42 CFR 422.582, as amended effective 1 January 2025).	Expedited: 72 hours. Standard pre-service: 30 days (7 days for Part B drugs). Payment: 60 days (42 CFR 422.590).	If the plan does not fully reverse itself it must send the case to the Independent Review Entity on its own (42 CFR 422.592); then an ALJ hearing when the amount in controversy meets the annual threshold, the Medicare Appeals Council and federal court. State external review does not apply.
Medicare Part D (drug plan or MA-PD) A stand-alone drug plan or the drug benefit inside a Medicare Advantage plan.	42 CFR Part 423, Subpart M; exceptions under 42 CFR 423.578.	65 calendar days from the date on the notice to request a redetermination (42 CFR 423.582, as amended effective 1 January 2025). Formulary, tiering and step-therapy exceptions need the prescriber's supporting statement (§ 423.578).	Redetermination: 7 calendar days standard, 72 hours expedited (42 CFR 423.590). Coverage determinations: 72 hours standard, 24 hours expedited, once the prescriber's statement is received (§§ 423.568, 423.572).	Independent Review Entity reconsideration on your request within 65 days of the redetermination notice (§ 423.600); then ALJ, Council and court.

Original Medicare (Parts A and B)

What you can demand. Follow the appeal instructions on the Medicare Summary Notice or use form CMS-20027. Your provider can appeal for you; any other representative needs form CMS-1696.

How to open the appeal. Cite 42 CFR 405.942 and the coverage rule that applies (the national or local coverage determination), and attach the treating clinician's statement addressed to each coverage criterion.

Medicare Advantage (Part C)

What you can demand. The plan may not apply internal criteria that are more restrictive than Medicare's national and local coverage determinations, and must decide medical necessity on your individual circumstances (42 CFR 422.101(b), (c)). You can ask for the case file and the criteria used.

How to open the appeal. Cite 42 CFR 422.582 and 422.101(c): the plan must decide on your individual circumstances under Medicare coverage rules, and must forward an unfavorable reconsideration to the IRE itself.

Medicare Part D (drug plan or MA-PD)

What you can demand. The exception turns on the prescriber's statement that the formulary alternative would be less effective or would harm you (42 CFR 423.578(b)(5)).

How to open the appeal. Cite 42 CFR 423.578 and 423.582 and attach the prescriber's supporting statement written to the exception standard.

Primary sources for this table

Windows are federal floors or the rule as written; the denial notice controls. Reviewed 13 September 2026. General information, not legal advice; Apellica is not a law firm.

What Medicare (Original + Advantage) denies for inpatient rehabilitation

The inpatient rehabilitation services most often denied:

IRF admission after stroke, brain injury, spinal cord injury, hip fracture, or major joint replacement
Continued-stay days once the plan decides goals can be met at a lower level of care
Transfer from an acute hospital to IRF instead of a skilled nursing facility
Rehab after cardiac surgery, transplant, or prolonged ICU stay (deconditioning)

Why inpatient rehabilitation claims get denied

A typical Medicare (Original + Advantage) inpatient rehabilitation denial almost always cites one of these reasons. Each one maps to a specific rebuttal in the appeal:

Plan says a skilled nursing facility or home health is 'the appropriate level of care'
Therapy intensity (3 hours a day) is judged not tolerable or not required
No documented need for daily physician supervision
Pre-admission screening or physician certification missing from the record
Medicare Advantage plan applied internal criteria beyond the IRF rule

The Medicare (Original + Advantage) appeal process

Appeal levels: 5 federal levels. Each has its own deadline; the ALJ and court levels require the amount in controversy to meet the annual threshold CMS publishes.

Carrier timing: 120 days from the notice for level 1 in Original Medicare (redetermination) or 65 days for Medicare Advantage reconsideration (42 CFR 422.582). Later levels: 180 days for the QIC reconsideration in Original Medicare, then 60 days each.

Inpatient rehab timing for Medicare (Original + Advantage): the filing windows and decision clocks in the table above apply; the date on the notice controls.

What we know about Medicare (Original + Advantage): Medicare cases require a CMS-1696 Appointment of Representative form for us to act on your behalf. We provide this at intake.

Common Medicare (Original + Advantage) denial patterns for inpatient rehabilitation

Original Medicare: 5-level appeal. Redetermination by MAC → reconsideration by QIC → ALJ hearing → Medicare Appeals Council → federal district court. The QIC and ALJ levels reverse a substantial share of denials when properly briefed.
Medicare Advantage: identical 5-level ladder. MA plans must follow the same federal appeal structure as Original Medicare. Plan-level reconsideration → Independent Review Entity (Maximus) → ALJ → Council → federal court.
Part D drug coverage denials. Part D appeals follow a separate but parallel ladder. Tiering exceptions and formulary exceptions are filed before a coverage determination challenge.

How to win your Medicare (Original + Advantage) inpatient rehabilitation appeal

Strategy for inpatient rehabilitation: Get the rehabilitation physician's admission note, the pre-admission screening, and the therapy evaluations. Map each element of the IRF criteria to a page in the record: multiple disciplines, intensity, medical supervision, expected improvement. For Medicare Advantage, cite 42 CFR 422.101(b)(2), which binds the plan to traditional Medicare coverage rules. If the patient is already admitted and the plan is ending coverage, use the fast-track review (see Timing) before the effective date so services continue during review.

Filed against Medicare (Original + Advantage), that strategy rides on this procedural spine:

Procedural-rights anchor. Cite 42 CFR 405.942 and the coverage rule that applies (the national or local coverage determination), and attach the treating clinician's statement addressed to each coverage criterion. If your Medicare (Original + Advantage) coverage is a different plan type (Medicare Advantage, Medicare Part D), use that row of the table above instead; the rule and the deadline change with the plan, not the carrier.
Criteria-disclosure demand. Medicare (Original + Advantage) frequently denies on "not medically necessary" without disclosing the clinical criteria applied. Once disclosed, those criteria become the rebuttal map.
Controlling-standard citation. For Medicare and Medicare Advantage, the IRF coverage criteria at 42 CFR 412.622(a)(3): a need for active and ongoing therapy in at least two disciplines (one being PT or OT), an intensive program (generally 3 hours a day at least 5 days a week), close physician supervision, and a reasonable expectation of measurable improvement. Medicare Advantage plans may not apply stricter internal criteria than traditional Medicare (42 CFR 422.101(b)). Commercial plans apply their own level-of-care criteria (often MCG or InterQual), which must be disclosed on request under the rules that govern your plan (see the table above).
Treating-provider attestation. A letter from the treating physician addressing each criterion in Medicare (Original + Advantage)'s own policy language. This is the single strongest evidentiary element.
Requested action. A specific demand to reverse the inpatient rehabilitation denial and approve the service, not a general "please reconsider."

Documents you'll need for your Medicare (Original + Advantage) inpatient rehabilitation appeal

The denial or non-coverage notice with its effective date
Rehabilitation physician admission note and pre-admission screening
PT, OT and speech therapy evaluations and daily notes
Acute hospital discharge summary
Any plan-issued clinical criteria (request them in writing)

What a inpatient rehabilitation appeal can recover

Typical recovery for inpatient rehabilitation cases runs An IRF stay is billed per day at rates that make even a short denied stay a significant sum; the amount at stake depends on the length of stay and the plan's allowed amount.. The exact figure depends on the specific service and your plan's contracted rates.

Medicare (Original + Advantage) inpatient rehabilitation appeals: frequently asked questions

Can Medicare (Original + Advantage) send me to a nursing home instead of inpatient rehab?

The plan can propose it, and you can appeal it. The question the reviewer must answer is whether the record shows a need for intensive, multidisciplinary, physician-supervised rehabilitation. If it does, a skilled nursing facility is not an equivalent level of care.

How fast does a Medicare (Original + Advantage) inpatient rehab appeal move?

Pre-admission and continued-stay disputes qualify as urgent because delay can jeopardize recovery. Urgent decisions are due within 72 hours. For Medicare Advantage, a fast-track QIO review requested before the effective date keeps coverage in place during the review.

Does the three-hour rule mean I have to do three hours of therapy every day?

The Medicare IRF criteria describe an intensive program that generally means 3 hours a day at least 5 days a week, but the rule allows the intensity to be measured over a 7-day period in individual cases and does not require it from day one for every patient. The physician's documentation of why the patient needs and can participate in the program is what matters.

What if Medicare (Original + Advantage) already cut off my stay?

Appeal anyway. A retrospective appeal can recover days the plan refused to cover, and the medical record from those days is the evidence.

What Apellica does for Medicare (Original + Advantage) inpatient rehabilitation appeals

We file appeals against Medicare (Original + Advantage) specifically configured to its internal review process. Every inpatient rehabilitation appeal embeds the criteria-disclosure demand, the procedural-rights anchor, the controlling-standard citation above, treating-provider attestation language, and the peer-reviewed evidence relevant to the denied service.

Cost: $0 upfront. We work on contingency for Medicare (Original + Advantage) appeals, if the appeal succeeds, we collect a percentage of the recovered claim value. If it fails, you owe nothing.

Start your Medicare (Original + Advantage) inpatient rehabilitation appeal

Submit a 2-minute intake. A senior reviewer responds within one business day with the specific appeal strategy for your case.

Start free appeal review →

Medicare (Original + Advantage) denied your inpatient rehabilitation? Here is what to do next